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- #Sqlite debug with db browser for sqlite install#
- #Sqlite debug with db browser for sqlite driver#
- #Sqlite debug with db browser for sqlite full#
Maximum number of mismatches to allow in the realignments.Ī character vector containing the chromosomes to consider or NULL in which case all available chromosomes from the specified genome will be used.Įither NULL or a named list containing the following elements: "AUTHOR", "AUTHOREMAIL", "BOWTIE_PATH", "GENOME_PATH", "VCF_QUERY_CMD", "VCF_TYPE". These will be the probes that go through the SNP masking process and will beĬandidates for removal due to being impacted by variants. 'SNV' or 'INDEL').Ī character vector containing the path to the tab delimited probe sequence file distributed by Affymetrix.Ī character vector containing the name of the output database name.Ĭategories of probes to keep from the e.g. If missing or NULL, noĪ list containing named elements with any additional values to be passed to filter.func if applicable.Ī character vector containing the path to one or more VCF files.Ī character vector containing the desired label for each VCF file (e.g. Number of iterations to be limited to for testing purposesĪ function to be used to filter a list as returned by scanVcf For example see oligoMask::. Label associate with the VCF file, usually 'SNV' or 'INDEL' GRanges object containing the probe alignments information The number of aligned probes to be processed at a given timeĬharacter vector containing the genotype columns to be used Logical indicating whether additional messages should be displayed to the user The subset of tables the procedure should be limited to or NULL. List or other type of data to be inserted into the database using the function in the dta.func element of the TableSchemaList. sql.js: SQLite compiled to. ( db.con, db.schema, ins.vals, use.tables = NULL, bug = FALSE ) ( db.schema, window.size, vcf.name, db.con, ange, vcf.type = "SNV", use.tables = NULL, limit = NULL, bug = FALSE, vcf.param = NULL, filter.func = NULL, filter.params = list ()) .db ( vcf.files, vcf.labels, , strain.names, bs.genome, db.schema, db.name = "test.db", keep.category = "main", window.size = 1000, max.mismatch = 1, limit.chr = NULL, bug = FALSE, = NULL ).Bun sqlite3: bun:sqlite is a high-performance builtin SQLite3 module for bun.js.better-sqlite3: Totes itself as the fastest and.You might want to try these other SQLite libraries:
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This library and the library it primarily supports, sqlite3, may not be the best library thatįits your use-case. DBeaver: Full-featured multi-platform database tool and designer.HeidiSQL: Full-featured database editor.SQLite Studio: A free, open source, multi-platform SQLite database manager written in C++, with use of Qt framework.Starts up a server that provides a web interface to your SQLite data. datasette: Datasette is a tool for exploring and publishingĭata.DB Browser for SQLite: Desktop-based browser.Beekeeper Studio: Open Source SQL Editor and Database Manager.
#Sqlite debug with db browser for sqlite full#
See the docs directory for full documentation. Result is an array of rows, you can now have array-autocompletion dataĬonst result = await db.all('SELECT col FROM tbl') result will be of type Row, allowing Typescript supported IDEs to autocomplete on the properties!Ĭonst result = await db.get('SELECT col FROM tbl WHERE col = ?', 'test') This allows your IDE to perform better autocompleteĪnd the typescript compiler to perform better static type analysis. To specify the data type of your returned data. Most methods allow for the use of generics Use generics to get better typings on your rows sqlite3.Database, sqlite3.Statement is the default if no explicit generic is specified
#Sqlite debug with db browser for sqlite driver#
Specify typings for a specific database driver // Assuming you have installed
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If you want to enable the database object cache import sqlite3 from 'sqlite3'Įnable verbose / debug mode import sqlite3 from 'sqlite3'įor more info, see this doc. you would have to import / invoke this in another file Opening the database Without caching import sqlite3 from 'sqlite3' This module has the same API as the original sqlite3 library ( docs),Įxcept that all its API methods return ES6 Promises and do not accept callback arguments (with the exception of each()).
#Sqlite debug with db browser for sqlite install#
# install v3 instead, and look at the v3 branch readme for usage details # If you need a legacy version for an older version of nodejs $ npm install sqlite3 -save Install sqlite # v4 of sqlite is targeted for nodejs 10 and on. Most people who use this library will use sqlite3Īny library that conforms to the sqlite3 ( API) Use generics to get better typings on your rows.Specify typings for a specific database driver.Note v4 of sqlite has breaking changes compared to v3! Please see CHANGELOG.md for more details. A wrapper library written in Typescript with ZERO dependencies that adds ES6 promisesĪnd SQL-based migrations API to sqlite3 ( docs).